Cluster: HRGMv2_4702_CGC11
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_4702
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_73 | 84913 | 85899 | + | GT8 |
| pfam | HRGMv2_4702_5 | HRGMv2_4702_5_74 | 85924 | 87153 | + | Wzy_C |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_75 | 87154 | 88137 | + | GT8 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_76 | 88150 | 89070 | + | GT17 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_77 | 89058 | 90137 | - | GT4 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_78 | 90145 | 91140 | - | GT8 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_79 | 91142 | 92194 | - | GT9 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_80 | 92199 | 93176 | - | GT9 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_81 | 93266 | 94084 | + | CE4 |
| pfam | HRGMv2_4702_5 | HRGMv2_4702_5_82 | 94141 | 95007 | - | PDDEXK_2 |
| TC | HRGMv2_4702_5 | HRGMv2_4702_5_83 | 95092 | 95742 | - | 9.B.2.5.4 |
| TC | HRGMv2_4702_5 | HRGMv2_4702_5_84 | 95726 | 96373 | - | 9.B.2.5.4 |
| pfam | HRGMv2_4702_5 | HRGMv2_4702_5_85 | 96504 | 97523 | - | Stealth_CR2 | Stealth_CR1 |
| pfam | HRGMv2_4702_5 | HRGMv2_4702_5_86 | 97541 | 98725 | - | Aminotran_5 | DegT_DnrJ_EryC1 | Beta_elim_lyase |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_87 | 98715 | 99812 | - | GH109 |
| pfam | HRGMv2_4702_5 | HRGMv2_4702_5_88 | 99835 | 100845 | - | Stealth_CR2 | Stealth_CR1 |
| CAZyme | HRGMv2_4702_5 | HRGMv2_4702_5_89 | 100835 | 101869 | - | GT9 |
Gene ID: HRGMv2_4702_5_73
Type: CAZyme
Location: 84913 - 85899 (+)
Type: CAZyme
Location: 84913 - 85899 (+)
Gene ID: HRGMv2_4702_5_74
Type: pfam
Location: 85924 - 87153 (+)
Type: pfam
Location: 85924 - 87153 (+)
Gene ID: HRGMv2_4702_5_75
Type: CAZyme
Location: 87154 - 88137 (+)
Type: CAZyme
Location: 87154 - 88137 (+)
Gene ID: HRGMv2_4702_5_76
Type: CAZyme
Location: 88150 - 89070 (+)
Type: CAZyme
Location: 88150 - 89070 (+)
Gene ID: HRGMv2_4702_5_77
Type: CAZyme
Location: 89058 - 90137 (-)
Type: CAZyme
Location: 89058 - 90137 (-)
Gene ID: HRGMv2_4702_5_78
Type: CAZyme
Location: 90145 - 91140 (-)
Type: CAZyme
Location: 90145 - 91140 (-)
Gene ID: HRGMv2_4702_5_79
Type: CAZyme
Location: 91142 - 92194 (-)
Type: CAZyme
Location: 91142 - 92194 (-)
Gene ID: HRGMv2_4702_5_80
Type: CAZyme
Location: 92199 - 93176 (-)
Type: CAZyme
Location: 92199 - 93176 (-)
Gene ID: HRGMv2_4702_5_81
Type: CAZyme
Location: 93266 - 94084 (+)
Type: CAZyme
Location: 93266 - 94084 (+)
Gene ID: HRGMv2_4702_5_82
Type: pfam
Location: 94141 - 95007 (-)
Type: pfam
Location: 94141 - 95007 (-)
Gene ID: HRGMv2_4702_5_83
Type: TC
Location: 95092 - 95742 (-)
Type: TC
Location: 95092 - 95742 (-)
Gene ID: HRGMv2_4702_5_84
Type: TC
Location: 95726 - 96373 (-)
Type: TC
Location: 95726 - 96373 (-)
Gene ID: HRGMv2_4702_5_85
Type: pfam
Location: 96504 - 97523 (-)
Type: pfam
Location: 96504 - 97523 (-)
Gene ID: HRGMv2_4702_5_86
Type: pfam
Location: 97541 - 98725 (-)
Type: pfam
Location: 97541 - 98725 (-)
Gene ID: HRGMv2_4702_5_87
Type: CAZyme
Location: 98715 - 99812 (-)
Type: CAZyme
Location: 98715 - 99812 (-)
Gene ID: HRGMv2_4702_5_88
Type: pfam
Location: 99835 - 100845 (-)
Type: pfam
Location: 99835 - 100845 (-)
Gene ID: HRGMv2_4702_5_89
Type: CAZyme
Location: 100835 - 101869 (-)
Type: CAZyme
Location: 100835 - 101869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.