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Cluster: HRGMv2_4702_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4702_5 HRGMv2_4702_5_45 50450 53455 - GH2
CAZyme HRGMv2_4702_5 HRGMv2_4702_5_46 54082 55956 - CBM61 | GH53
TC HRGMv2_4702_5 HRGMv2_4702_5_47 55976 57400 - 1.B.23.1.6
CAZyme HRGMv2_4702_5 HRGMv2_4702_5_48 57427 59760 - GH35
TC HRGMv2_4702_5 HRGMv2_4702_5_49 59782 61065 - 2.A.1.5.1
TF HRGMv2_4702_5 HRGMv2_4702_5_50 61332 62132 + HTH_AraC | HTH_AraC
TC HRGMv2_4702_5 HRGMv2_4702_5_51 62276 63193 - 2.A.6.4.2
TC HRGMv2_4702_5 HRGMv2_4702_5_52 63190 64431 - 2.A.6.4.3
Gene ID: HRGMv2_4702_5_45
Type: CAZyme
Location: 50450 - 53455 (-)
Gene ID: HRGMv2_4702_5_46
Type: CAZyme
Location: 54082 - 55956 (-)
Gene ID: HRGMv2_4702_5_47
Type: TC
Location: 55976 - 57400 (-)
Gene ID: HRGMv2_4702_5_48
Type: CAZyme
Location: 57427 - 59760 (-)
Gene ID: HRGMv2_4702_5_49
Type: TC
Location: 59782 - 61065 (-)
Gene ID: HRGMv2_4702_5_50
Type: TF
Location: 61332 - 62132 (+)
Gene ID: HRGMv2_4702_5_51
Type: TC
Location: 62276 - 63193 (-)
Gene ID: HRGMv2_4702_5_52
Type: TC
Location: 63190 - 64431 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Selenomonadales
→
Family
Selenomonadaceae
→
Genus
Megamonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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