Cluster: HRGMv2_4700_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4700_38 | HRGMv2_4700_38_2 | 373 | 2397 | + | 3.A.3.5.10 |
| NULL(UNKNOWN) | HRGMv2_4700_38 | HRGMv2_4700_38_3 | 2683 | 2871 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4700_38 | HRGMv2_4700_38_4 | 2874 | 3431 | + | Sortase |
| CAZyme | HRGMv2_4700_38 | HRGMv2_4700_38_5 | 3428 | 4708 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4700_38 | HRGMv2_4700_38_6 | 4710 | 5972 | - | CBM13 |
Gene ID: HRGMv2_4700_38_2
Type: TC
Location: 373 - 2397 (+)
Type: TC
Location: 373 - 2397 (+)
Gene ID: HRGMv2_4700_38_3
Type:
Location: 2683 - 2871 (+)
Type:
Location: 2683 - 2871 (+)
Gene ID: HRGMv2_4700_38_4
Type: pfam
Location: 2874 - 3431 (+)
Type: pfam
Location: 2874 - 3431 (+)
Gene ID: HRGMv2_4700_38_5
Type: CAZyme
Location: 3428 - 4708 (+)
Type: CAZyme
Location: 3428 - 4708 (+)
Gene ID: HRGMv2_4700_38_6
Type: CAZyme
Location: 4710 - 5972 (-)
Type: CAZyme
Location: 4710 - 5972 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Patescibacteria
Class
Saccharimonadia
Order
Saccharimonadales
Family
Saccharimonadaceae
Genus
Saccharimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.