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Cluster: HRGMv2_4700_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4700_14 HRGMv2_4700_14_13 11582 12775 + GT4
CAZyme HRGMv2_4700_14 HRGMv2_4700_14_14 12772 13506 - GT2
peptidase HRGMv2_4700_14 HRGMv2_4700_14_15 13526 14380 + S33.UPW
CAZyme HRGMv2_4700_14 HRGMv2_4700_14_16 14406 15680 + GT4
pfam HRGMv2_4700_14 HRGMv2_4700_14_17 15677 16150 - SmpB
TC HRGMv2_4700_14 HRGMv2_4700_14_18 16609 18378 + 3.A.1.121.3
NULL(UNKNOWN) HRGMv2_4700_14 HRGMv2_4700_14_19 18416 19078 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4700_14 HRGMv2_4700_14_20 19169 20728 - 3.A.16.1.2
Gene ID: HRGMv2_4700_14_13
Type: CAZyme
Location: 11582 - 12775 (+)
Gene ID: HRGMv2_4700_14_14
Type: CAZyme
Location: 12772 - 13506 (-)
Gene ID: HRGMv2_4700_14_15
Type: peptidase
Location: 13526 - 14380 (+)
Gene ID: HRGMv2_4700_14_16
Type: CAZyme
Location: 14406 - 15680 (+)
Gene ID: HRGMv2_4700_14_17
Type: pfam
Location: 15677 - 16150 (-)
Gene ID: HRGMv2_4700_14_18
Type: TC
Location: 16609 - 18378 (+)
Gene ID: HRGMv2_4700_14_19
Type:
Location: 18416 - 19078 (-)
Gene ID: HRGMv2_4700_14_20
Type: TC
Location: 19169 - 20728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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