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Cluster: HRGMv2_4696_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_1 HRGMv2_4696_1_819 856454 857002 + 2.A.56.3.4
TC HRGMv2_4696_1 HRGMv2_4696_1_820 857014 858582 + 2.A.56.3.4
TC HRGMv2_4696_1 HRGMv2_4696_1_821 858641 859759 + 2.A.56.3.4
TC HRGMv2_4696_1 HRGMv2_4696_1_822 860061 861200 + 1.B.70.1.11
pfam HRGMv2_4696_1 HRGMv2_4696_1_823 861604 862440 - Cupin_3 | Cupin_2 | Cupin_2
CAZyme HRGMv2_4696_1 HRGMv2_4696_1_824 862549 863976 - CE4
TC HRGMv2_4696_1 HRGMv2_4696_1_825 864245 864610 + 9.B.35.2.1
Gene ID: HRGMv2_4696_1_819
Type: TC
Location: 856454 - 857002 (+)
Gene ID: HRGMv2_4696_1_820
Type: TC
Location: 857014 - 858582 (+)
Gene ID: HRGMv2_4696_1_821
Type: TC
Location: 858641 - 859759 (+)
Gene ID: HRGMv2_4696_1_822
Type: TC
Location: 860061 - 861200 (+)
Gene ID: HRGMv2_4696_1_823
Type: pfam
Location: 861604 - 862440 (-)
Gene ID: HRGMv2_4696_1_824
Type: CAZyme
Location: 862549 - 863976 (-)
Gene ID: HRGMv2_4696_1_825
Type: TC
Location: 864245 - 864610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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