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Cluster: HRGMv2_4696_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_15 HRGMv2_4696_15_69 68720 69460 + 3.A.6.2.1
pfam HRGMv2_4696_15 HRGMv2_4696_15_70 69692 70540 + Flagellin_N | Flagellin_C
TC HRGMv2_4696_15 HRGMv2_4696_15_71 70939 72678 + 3.A.6.2.1
NULL(UNKNOWN) HRGMv2_4696_15 HRGMv2_4696_15_72 72681 73388 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4696_15 HRGMv2_4696_15_73 73385 74500 + 1.A.30.1.1
NULL(UNKNOWN) HRGMv2_4696_15 HRGMv2_4696_15_74 74497 75792 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4696_15 HRGMv2_4696_15_75 75789 77030 + Flg_hook
CAZyme HRGMv2_4696_15 HRGMv2_4696_15_76 77005 77541 + GH23
Gene ID: HRGMv2_4696_15_69
Type: TC
Location: 68720 - 69460 (+)
Gene ID: HRGMv2_4696_15_70
Type: pfam
Location: 69692 - 70540 (+)
Gene ID: HRGMv2_4696_15_71
Type: TC
Location: 70939 - 72678 (+)
Gene ID: HRGMv2_4696_15_72
Type:
Location: 72681 - 73388 (+)
Gene ID: HRGMv2_4696_15_73
Type: TC
Location: 73385 - 74500 (+)
Gene ID: HRGMv2_4696_15_74
Type:
Location: 74497 - 75792 (+)
Gene ID: HRGMv2_4696_15_75
Type: pfam
Location: 75789 - 77030 (+)
Gene ID: HRGMv2_4696_15_76
Type: CAZyme
Location: 77005 - 77541 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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