dbCAN Logo

Cluster: HRGMv2_4696_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4696_14 HRGMv2_4696_14_79 81846 82535 + GH23
pfam HRGMv2_4696_14 HRGMv2_4696_14_80 82532 82831 + TrbC
pfam HRGMv2_4696_14 HRGMv2_4696_14_81 82835 83176 + VirB3
TC HRGMv2_4696_14 HRGMv2_4696_14_82 83181 85559 + 3.A.7.2.1
pfam HRGMv2_4696_14 HRGMv2_4696_14_83 85559 86257 + T4SS
NULL(UNKNOWN) HRGMv2_4696_14 HRGMv2_4696_14_84 86254 86487 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4696_14 HRGMv2_4696_14_85 86492 87406 + 3.A.7.3.1
NULL(UNKNOWN) HRGMv2_4696_14 HRGMv2_4696_14_86 87424 87714 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4696_14 HRGMv2_4696_14_87 87714 88385 + 3.A.7.2.1
TC HRGMv2_4696_14 HRGMv2_4696_14_88 88385 89242 + 3.A.7.2.1
TC HRGMv2_4696_14 HRGMv2_4696_14_89 89248 90423 + 3.A.7.2.1
TC HRGMv2_4696_14 HRGMv2_4696_14_90 90432 91433 + 3.A.7.3.1
TC HRGMv2_4696_14 HRGMv2_4696_14_91 91655 94318 + 4.A.2.1.17
Gene ID: HRGMv2_4696_14_79
Type: CAZyme
Location: 81846 - 82535 (+)
Gene ID: HRGMv2_4696_14_80
Type: pfam
Location: 82532 - 82831 (+)
Gene ID: HRGMv2_4696_14_81
Type: pfam
Location: 82835 - 83176 (+)
Gene ID: HRGMv2_4696_14_82
Type: TC
Location: 83181 - 85559 (+)
Gene ID: HRGMv2_4696_14_83
Type: pfam
Location: 85559 - 86257 (+)
Gene ID: HRGMv2_4696_14_84
Type:
Location: 86254 - 86487 (+)
Gene ID: HRGMv2_4696_14_85
Type: TC
Location: 86492 - 87406 (+)
Gene ID: HRGMv2_4696_14_86
Type:
Location: 87424 - 87714 (+)
Gene ID: HRGMv2_4696_14_87
Type: TC
Location: 87714 - 88385 (+)
Gene ID: HRGMv2_4696_14_88
Type: TC
Location: 88385 - 89242 (+)
Gene ID: HRGMv2_4696_14_89
Type: TC
Location: 89248 - 90423 (+)
Gene ID: HRGMv2_4696_14_90
Type: TC
Location: 90432 - 91433 (+)
Gene ID: HRGMv2_4696_14_91
Type: TC
Location: 91655 - 94318 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List