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Cluster: HRGMv2_4696_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4696_12 HRGMv2_4696_12_35 43560 44288 - GT51
pfam HRGMv2_4696_12 HRGMv2_4696_12_36 44473 45387 + polyprenyl_synt
TF HRGMv2_4696_12 HRGMv2_4696_12_37 45447 45905 - DUF24
TC HRGMv2_4696_12 HRGMv2_4696_12_38 46001 47251 + 2.A.1.36.2
pfam HRGMv2_4696_12 HRGMv2_4696_12_39 47248 48519 - GcpE
pfam HRGMv2_4696_12 HRGMv2_4696_12_40 48704 49495 + adh_short | KR | adh_short_C2
TC HRGMv2_4696_12 HRGMv2_4696_12_41 49550 50743 - 2.A.1.60.3
TF HRGMv2_4696_12 HRGMv2_4696_12_42 50751 51533 - HTH_DeoR
TC HRGMv2_4696_12 HRGMv2_4696_12_43 51681 55193 - 3.B.1.1.1
TC HRGMv2_4696_12 HRGMv2_4696_12_44 55424 56539 - 3.A.1.4.3
TC HRGMv2_4696_12 HRGMv2_4696_12_45 56978 58093 - 3.A.1.4.3
pfam HRGMv2_4696_12 HRGMv2_4696_12_46 58246 58590 - DUF6867
TC HRGMv2_4696_12 HRGMv2_4696_12_47 58600 59346 - 3.A.1.4.8
TC HRGMv2_4696_12 HRGMv2_4696_12_48 59346 60719 - 3.A.1.4.1
TC HRGMv2_4696_12 HRGMv2_4696_12_49 60737 62119 - 3.A.1.4.8
TC HRGMv2_4696_12 HRGMv2_4696_12_50 62122 63045 - 3.A.1.4.1
Gene ID: HRGMv2_4696_12_35
Type: CAZyme
Location: 43560 - 44288 (-)
Gene ID: HRGMv2_4696_12_36
Type: pfam
Location: 44473 - 45387 (+)
Gene ID: HRGMv2_4696_12_37
Type: TF
Location: 45447 - 45905 (-)
Gene ID: HRGMv2_4696_12_38
Type: TC
Location: 46001 - 47251 (+)
Gene ID: HRGMv2_4696_12_39
Type: pfam
Location: 47248 - 48519 (-)
Gene ID: HRGMv2_4696_12_40
Type: pfam
Location: 48704 - 49495 (+)
Gene ID: HRGMv2_4696_12_41
Type: TC
Location: 49550 - 50743 (-)
Gene ID: HRGMv2_4696_12_42
Type: TF
Location: 50751 - 51533 (-)
Gene ID: HRGMv2_4696_12_43
Type: TC
Location: 51681 - 55193 (-)
Gene ID: HRGMv2_4696_12_44
Type: TC
Location: 55424 - 56539 (-)
Gene ID: HRGMv2_4696_12_45
Type: TC
Location: 56978 - 58093 (-)
Gene ID: HRGMv2_4696_12_46
Type: pfam
Location: 58246 - 58590 (-)
Gene ID: HRGMv2_4696_12_47
Type: TC
Location: 58600 - 59346 (-)
Gene ID: HRGMv2_4696_12_48
Type: TC
Location: 59346 - 60719 (-)
Gene ID: HRGMv2_4696_12_49
Type: TC
Location: 60737 - 62119 (-)
Gene ID: HRGMv2_4696_12_50
Type: TC
Location: 62122 - 63045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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