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Cluster: HRGMv2_4696_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_8 HRGMv2_4696_8_121 127972 128718 + 3.A.1.3.23
TC HRGMv2_4696_8 HRGMv2_4696_8_122 128935 130581 + 3.A.1.3.17
CAZyme HRGMv2_4696_8 HRGMv2_4696_8_123 130562 131974 + GH1
pfam HRGMv2_4696_8 HRGMv2_4696_8_124 131967 132653 + adh_short | Epimerase | adh_short_C2
TC HRGMv2_4696_8 HRGMv2_4696_8_125 133162 136311 + 1.B.12.1.6
peptidase HRGMv2_4696_8 HRGMv2_4696_8_126 136491 137717 - M24.UNW
TC HRGMv2_4696_8 HRGMv2_4696_8_127 137936 139459 + 3.A.1.5.11
TC HRGMv2_4696_8 HRGMv2_4696_8_128 139617 140549 + 3.A.1.5.11
TC HRGMv2_4696_8 HRGMv2_4696_8_129 140546 141412 + 3.A.1.5.39
TC HRGMv2_4696_8 HRGMv2_4696_8_130 141409 142218 + 3.A.1.5.1
TC HRGMv2_4696_8 HRGMv2_4696_8_131 142215 142967 + 3.A.1.5.10
STP HRGMv2_4696_8 HRGMv2_4696_8_132 143282 143785 + Sigma70_r2 | Sigma70_r4_2
STP HRGMv2_4696_8 HRGMv2_4696_8_133 143812 144756 + FecR
TC HRGMv2_4696_8 HRGMv2_4696_8_134 144908 147361 + 1.B.14.1.10
STP HRGMv2_4696_8 HRGMv2_4696_8_135 147372 148265 + Peripla_BP_2
TC HRGMv2_4696_8 HRGMv2_4696_8_136 148262 150259 + 3.A.1.14.3
TF HRGMv2_4696_8 HRGMv2_4696_8_137 150561 151457 + HTH_1
NULL(UNKNOWN) HRGMv2_4696_8 HRGMv2_4696_8_138 151482 151748 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4696_8 HRGMv2_4696_8_139 151998 153575 + 3.A.1.5.17
TC HRGMv2_4696_8 HRGMv2_4696_8_140 153575 154522 + 3.A.1.5.17
TC HRGMv2_4696_8 HRGMv2_4696_8_141 154519 155337 + 3.A.1.5.17
TC HRGMv2_4696_8 HRGMv2_4696_8_142 155334 156941 + 3.A.1.5.17
Gene ID: HRGMv2_4696_8_121
Type: TC
Location: 127972 - 128718 (+)
Gene ID: HRGMv2_4696_8_122
Type: TC
Location: 128935 - 130581 (+)
Gene ID: HRGMv2_4696_8_123
Type: CAZyme
Location: 130562 - 131974 (+)
Gene ID: HRGMv2_4696_8_124
Type: pfam
Location: 131967 - 132653 (+)
Gene ID: HRGMv2_4696_8_125
Type: TC
Location: 133162 - 136311 (+)
Gene ID: HRGMv2_4696_8_126
Type: peptidase
Location: 136491 - 137717 (-)
Gene ID: HRGMv2_4696_8_127
Type: TC
Location: 137936 - 139459 (+)
Gene ID: HRGMv2_4696_8_128
Type: TC
Location: 139617 - 140549 (+)
Gene ID: HRGMv2_4696_8_129
Type: TC
Location: 140546 - 141412 (+)
Gene ID: HRGMv2_4696_8_130
Type: TC
Location: 141409 - 142218 (+)
Gene ID: HRGMv2_4696_8_131
Type: TC
Location: 142215 - 142967 (+)
Gene ID: HRGMv2_4696_8_132
Type: STP
Location: 143282 - 143785 (+)
Gene ID: HRGMv2_4696_8_133
Type: STP
Location: 143812 - 144756 (+)
Gene ID: HRGMv2_4696_8_134
Type: TC
Location: 144908 - 147361 (+)
Gene ID: HRGMv2_4696_8_135
Type: STP
Location: 147372 - 148265 (+)
Gene ID: HRGMv2_4696_8_136
Type: TC
Location: 148262 - 150259 (+)
Gene ID: HRGMv2_4696_8_137
Type: TF
Location: 150561 - 151457 (+)
Gene ID: HRGMv2_4696_8_138
Type:
Location: 151482 - 151748 (-)
Gene ID: HRGMv2_4696_8_139
Type: TC
Location: 151998 - 153575 (+)
Gene ID: HRGMv2_4696_8_140
Type: TC
Location: 153575 - 154522 (+)
Gene ID: HRGMv2_4696_8_141
Type: TC
Location: 154519 - 155337 (+)
Gene ID: HRGMv2_4696_8_142
Type: TC
Location: 155334 - 156941 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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