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Cluster: HRGMv2_4696_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_217 245386 246708 - GH140
pfam HRGMv2_4696_7 HRGMv2_4696_7_218 246705 248060 - Aminotran_3
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_219 248087 249319 - GT4
pfam HRGMv2_4696_7 HRGMv2_4696_7_220 249574 250800 + PS_pyruv_trans
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_221 250882 251856 - GT2
pfam HRGMv2_4696_7 HRGMv2_4696_7_222 251868 253352 - Polysacc_synt | Polysacc_synt_3
TC HRGMv2_4696_7 HRGMv2_4696_7_223 253628 254776 + 9.B.146.1.7
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_224 254773 255660 + GT2
Gene ID: HRGMv2_4696_7_217
Type: CAZyme
Location: 245386 - 246708 (-)
Gene ID: HRGMv2_4696_7_218
Type: pfam
Location: 246705 - 248060 (-)
Gene ID: HRGMv2_4696_7_219
Type: CAZyme
Location: 248087 - 249319 (-)
Gene ID: HRGMv2_4696_7_220
Type: pfam
Location: 249574 - 250800 (+)
Gene ID: HRGMv2_4696_7_221
Type: CAZyme
Location: 250882 - 251856 (-)
Gene ID: HRGMv2_4696_7_222
Type: pfam
Location: 251868 - 253352 (-)
Gene ID: HRGMv2_4696_7_223
Type: TC
Location: 253628 - 254776 (+)
Gene ID: HRGMv2_4696_7_224
Type: CAZyme
Location: 254773 - 255660 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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