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Cluster: HRGMv2_4696_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_162 180874 183558 - GT4
pfam HRGMv2_4696_7 HRGMv2_4696_7_163 183548 185053 - DUF6212
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_164 185303 186523 - GT4
TF HRGMv2_4696_7 HRGMv2_4696_7_165 186569 187138 - 0042156
TC HRGMv2_4696_7 HRGMv2_4696_7_166 187338 189113 + 3.A.1.110.6
TC HRGMv2_4696_7 HRGMv2_4696_7_167 189110 190525 + 8.A.1.3.3
pfam HRGMv2_4696_7 HRGMv2_4696_7_168 190909 191568 + HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind | HemolysinCabind
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_169 191707 193968 + GT2
pfam HRGMv2_4696_7 HRGMv2_4696_7_170 193965 194804 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_171 194804 196063 + GT4
NULL(UNKNOWN) HRGMv2_4696_7 HRGMv2_4696_7_172 196074 196844 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_173 196946 199117 + GT2
CAZyme HRGMv2_4696_7 HRGMv2_4696_7_174 199114 200436 + GT4
pfam HRGMv2_4696_7 HRGMv2_4696_7_175 200474 201655 + PS_pyruv_trans
TC HRGMv2_4696_7 HRGMv2_4696_7_176 201659 202726 - 2.A.86.2.2
Gene ID: HRGMv2_4696_7_162
Type: CAZyme
Location: 180874 - 183558 (-)
Gene ID: HRGMv2_4696_7_163
Type: pfam
Location: 183548 - 185053 (-)
Gene ID: HRGMv2_4696_7_164
Type: CAZyme
Location: 185303 - 186523 (-)
Gene ID: HRGMv2_4696_7_165
Type: TF
Location: 186569 - 187138 (-)
Gene ID: HRGMv2_4696_7_166
Type: TC
Location: 187338 - 189113 (+)
Gene ID: HRGMv2_4696_7_167
Type: TC
Location: 189110 - 190525 (+)
Gene ID: HRGMv2_4696_7_168
Type: pfam
Location: 190909 - 191568 (+)
Gene ID: HRGMv2_4696_7_169
Type: CAZyme
Location: 191707 - 193968 (+)
Gene ID: HRGMv2_4696_7_170
Type: pfam
Location: 193965 - 194804 (+)
Gene ID: HRGMv2_4696_7_171
Type: CAZyme
Location: 194804 - 196063 (+)
Gene ID: HRGMv2_4696_7_172
Type:
Location: 196074 - 196844 (+)
Gene ID: HRGMv2_4696_7_173
Type: CAZyme
Location: 196946 - 199117 (+)
Gene ID: HRGMv2_4696_7_174
Type: CAZyme
Location: 199114 - 200436 (+)
Gene ID: HRGMv2_4696_7_175
Type: pfam
Location: 200474 - 201655 (+)
Gene ID: HRGMv2_4696_7_176
Type: TC
Location: 201659 - 202726 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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