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Cluster: HRGMv2_4696_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_6 HRGMv2_4696_6_139 151838 153199 + 2.A.46.1.8
CAZyme HRGMv2_4696_6 HRGMv2_4696_6_140 153240 154286 - GH177
pfam HRGMv2_4696_6 HRGMv2_4696_6_141 154295 155080 - ThuA
TC HRGMv2_4696_6 HRGMv2_4696_6_142 155150 156151 - 3.A.1.1.17
TC HRGMv2_4696_6 HRGMv2_4696_6_143 156160 156987 - 3.A.1.1.17
TC HRGMv2_4696_6 HRGMv2_4696_6_144 156989 157972 - 3.A.1.1.17
TC HRGMv2_4696_6 HRGMv2_4696_6_145 158068 159333 - 3.A.1.1.17
Gene ID: HRGMv2_4696_6_139
Type: TC
Location: 151838 - 153199 (+)
Gene ID: HRGMv2_4696_6_140
Type: CAZyme
Location: 153240 - 154286 (-)
Gene ID: HRGMv2_4696_6_141
Type: pfam
Location: 154295 - 155080 (-)
Gene ID: HRGMv2_4696_6_142
Type: TC
Location: 155150 - 156151 (-)
Gene ID: HRGMv2_4696_6_143
Type: TC
Location: 156160 - 156987 (-)
Gene ID: HRGMv2_4696_6_144
Type: TC
Location: 156989 - 157972 (-)
Gene ID: HRGMv2_4696_6_145
Type: TC
Location: 158068 - 159333 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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