dbCAN Logo

Cluster: HRGMv2_4696_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_5 HRGMv2_4696_5_333 350487 352109 + 3.A.1.121.4
CAZyme HRGMv2_4696_5 HRGMv2_4696_5_334 352749 353885 - GT2
pfam HRGMv2_4696_5 HRGMv2_4696_5_335 353879 354424 - dTDP_sugar_isom | Polysacc_synt_C
TC HRGMv2_4696_5 HRGMv2_4696_5_336 354971 355777 + 3.A.1.3.11
pfam HRGMv2_4696_5 HRGMv2_4696_5_337 356174 356671 + Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_4696_5 HRGMv2_4696_5_338 356804 359161 + 2.A.21.9.1
TF HRGMv2_4696_5 HRGMv2_4696_5_339 359163 360524 + HTH_8
TC HRGMv2_4696_5 HRGMv2_4696_5_340 360655 362031 + 2.A.38.1.1
Gene ID: HRGMv2_4696_5_333
Type: TC
Location: 350487 - 352109 (+)
Gene ID: HRGMv2_4696_5_334
Type: CAZyme
Location: 352749 - 353885 (-)
Gene ID: HRGMv2_4696_5_335
Type: pfam
Location: 353879 - 354424 (-)
Gene ID: HRGMv2_4696_5_336
Type: TC
Location: 354971 - 355777 (+)
Gene ID: HRGMv2_4696_5_337
Type: pfam
Location: 356174 - 356671 (+)
Gene ID: HRGMv2_4696_5_338
Type: TC
Location: 356804 - 359161 (+)
Gene ID: HRGMv2_4696_5_339
Type: TF
Location: 359163 - 360524 (+)
Gene ID: HRGMv2_4696_5_340
Type: TC
Location: 360655 - 362031 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List