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Cluster: HRGMv2_4696_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_4 HRGMv2_4696_4_101 108400 109467 + 3.A.1.105.16
TC HRGMv2_4696_4 HRGMv2_4696_4_102 109464 112244 + 3.A.1.105.16
TC HRGMv2_4696_4 HRGMv2_4696_4_103 112246 113358 + 3.A.1.105.16
TC HRGMv2_4696_4 HRGMv2_4696_4_104 113846 115711 + 1.B.14.1.4
STP HRGMv2_4696_4 HRGMv2_4696_4_105 115725 116564 + Peripla_BP_2
TC HRGMv2_4696_4 HRGMv2_4696_4_106 116557 117558 + 3.A.1.14.21
TC HRGMv2_4696_4 HRGMv2_4696_4_107 117555 118328 + 3.A.1.14.1
CAZyme HRGMv2_4696_4 HRGMv2_4696_4_108 118488 119618 - GH179
STP HRGMv2_4696_4 HRGMv2_4696_4_109 119896 120825 + Peripla_BP_1
TC HRGMv2_4696_4 HRGMv2_4696_4_110 120913 122043 + 3.A.1.2.15
TC HRGMv2_4696_4 HRGMv2_4696_4_111 122058 122837 + 3.A.1.2.7
Gene ID: HRGMv2_4696_4_101
Type: TC
Location: 108400 - 109467 (+)
Gene ID: HRGMv2_4696_4_102
Type: TC
Location: 109464 - 112244 (+)
Gene ID: HRGMv2_4696_4_103
Type: TC
Location: 112246 - 113358 (+)
Gene ID: HRGMv2_4696_4_104
Type: TC
Location: 113846 - 115711 (+)
Gene ID: HRGMv2_4696_4_105
Type: STP
Location: 115725 - 116564 (+)
Gene ID: HRGMv2_4696_4_106
Type: TC
Location: 116557 - 117558 (+)
Gene ID: HRGMv2_4696_4_107
Type: TC
Location: 117555 - 118328 (+)
Gene ID: HRGMv2_4696_4_108
Type: CAZyme
Location: 118488 - 119618 (-)
Gene ID: HRGMv2_4696_4_109
Type: STP
Location: 119896 - 120825 (+)
Gene ID: HRGMv2_4696_4_110
Type: TC
Location: 120913 - 122043 (+)
Gene ID: HRGMv2_4696_4_111
Type: TC
Location: 122058 - 122837 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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