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Cluster: HRGMv2_4696_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_3 HRGMv2_4696_3_309 301185 302465 - 2.A.1.6.10
NULL(UNKNOWN) HRGMv2_4696_3 HRGMv2_4696_3_310 302767 303135 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4696_3 HRGMv2_4696_3_311 303193 304794 + AA1
pfam HRGMv2_4696_3 HRGMv2_4696_3_312 304917 305438 + Sod_Cu
pfam HRGMv2_4696_3 HRGMv2_4696_3_313 305453 306781 - DAO | FAD_binding_3 | NAD_binding_8
TC HRGMv2_4696_3 HRGMv2_4696_3_314 306992 308086 + 3.A.1.10.4
TC HRGMv2_4696_3 HRGMv2_4696_3_315 308201 309217 + 3.A.1.10.2
TC HRGMv2_4696_3 HRGMv2_4696_3_316 309287 310966 + 3.A.1.10.2
Gene ID: HRGMv2_4696_3_309
Type: TC
Location: 301185 - 302465 (-)
Gene ID: HRGMv2_4696_3_310
Type:
Location: 302767 - 303135 (+)
Gene ID: HRGMv2_4696_3_311
Type: CAZyme
Location: 303193 - 304794 (+)
Gene ID: HRGMv2_4696_3_312
Type: pfam
Location: 304917 - 305438 (+)
Gene ID: HRGMv2_4696_3_313
Type: pfam
Location: 305453 - 306781 (-)
Gene ID: HRGMv2_4696_3_314
Type: TC
Location: 306992 - 308086 (+)
Gene ID: HRGMv2_4696_3_315
Type: TC
Location: 308201 - 309217 (+)
Gene ID: HRGMv2_4696_3_316
Type: TC
Location: 309287 - 310966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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