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Cluster: HRGMv2_4696_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_2 HRGMv2_4696_2_278 284156 284971 + 3.A.1.4.7
TC HRGMv2_4696_2 HRGMv2_4696_2_279 284964 285683 + 3.A.1.4.1
TC HRGMv2_4696_2 HRGMv2_4696_2_280 285712 286575 + 3.A.1.4.10
TC HRGMv2_4696_2 HRGMv2_4696_2_281 286577 287578 + 3.A.1.4.7
CAZyme HRGMv2_4696_2 HRGMv2_4696_2_282 287642 289240 + AA3_2
TC HRGMv2_4696_2 HRGMv2_4696_2_283 289464 290300 + 3.A.1.24.1
TC HRGMv2_4696_2 HRGMv2_4696_2_284 290491 291549 + 3.A.1.24.1
TC HRGMv2_4696_2 HRGMv2_4696_2_285 291530 292195 + 3.A.1.24.5
Gene ID: HRGMv2_4696_2_278
Type: TC
Location: 284156 - 284971 (+)
Gene ID: HRGMv2_4696_2_279
Type: TC
Location: 284964 - 285683 (+)
Gene ID: HRGMv2_4696_2_280
Type: TC
Location: 285712 - 286575 (+)
Gene ID: HRGMv2_4696_2_281
Type: TC
Location: 286577 - 287578 (+)
Gene ID: HRGMv2_4696_2_282
Type: CAZyme
Location: 287642 - 289240 (+)
Gene ID: HRGMv2_4696_2_283
Type: TC
Location: 289464 - 290300 (+)
Gene ID: HRGMv2_4696_2_284
Type: TC
Location: 290491 - 291549 (+)
Gene ID: HRGMv2_4696_2_285
Type: TC
Location: 291530 - 292195 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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