dbCAN Logo

Cluster: HRGMv2_4696_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4696_2 HRGMv2_4696_2_222 218893 220059 - CE9
STP HRGMv2_4696_2 HRGMv2_4696_2_223 220056 221087 - SIS | SIS
TF HRGMv2_4696_2 HRGMv2_4696_2_224 221090 221815 - GntR
TC HRGMv2_4696_2 HRGMv2_4696_2_225 221940 225035 - 2.A.6.2.27
TC HRGMv2_4696_2 HRGMv2_4696_2_226 225032 226141 - 2.A.6.2.27
TC HRGMv2_4696_2 HRGMv2_4696_2_227 226138 227247 - 2.A.6.2.27
NULL(UNKNOWN) HRGMv2_4696_2 HRGMv2_4696_2_228 227512 227808 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4696_2 HRGMv2_4696_2_229 227808 230120 - 3.D.1.9.2
Gene ID: HRGMv2_4696_2_222
Type: CAZyme
Location: 218893 - 220059 (-)
Gene ID: HRGMv2_4696_2_223
Type: STP
Location: 220056 - 221087 (-)
Gene ID: HRGMv2_4696_2_224
Type: TF
Location: 221090 - 221815 (-)
Gene ID: HRGMv2_4696_2_225
Type: TC
Location: 221940 - 225035 (-)
Gene ID: HRGMv2_4696_2_226
Type: TC
Location: 225032 - 226141 (-)
Gene ID: HRGMv2_4696_2_227
Type: TC
Location: 226138 - 227247 (-)
Gene ID: HRGMv2_4696_2_228
Type:
Location: 227512 - 227808 (-)
Gene ID: HRGMv2_4696_2_229
Type: TC
Location: 227808 - 230120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List