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Cluster: HRGMv2_4696_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_2 HRGMv2_4696_2_105 94704 95135 - 2.A.7.34.4
pfam HRGMv2_4696_2 HRGMv2_4696_2_106 95305 96234 + Extensin-like_C
pfam HRGMv2_4696_2 HRGMv2_4696_2_107 96371 96760 - 4HBT | 4HBT_3
TC HRGMv2_4696_2 HRGMv2_4696_2_108 96982 97578 + 1.E.20.1.3
pfam HRGMv2_4696_2 HRGMv2_4696_2_109 97704 100556 + DEAD | Helicase_C | UVR | ResIII | UvrB | UvrB_inter
peptidase HRGMv2_4696_2 HRGMv2_4696_2_110 100633 101082 - I01.UPW
CAZyme HRGMv2_4696_2 HRGMv2_4696_2_111 101248 102147 + GH23
Gene ID: HRGMv2_4696_2_105
Type: TC
Location: 94704 - 95135 (-)
Gene ID: HRGMv2_4696_2_106
Type: pfam
Location: 95305 - 96234 (+)
Gene ID: HRGMv2_4696_2_107
Type: pfam
Location: 96371 - 96760 (-)
Gene ID: HRGMv2_4696_2_108
Type: TC
Location: 96982 - 97578 (+)
Gene ID: HRGMv2_4696_2_109
Type: pfam
Location: 97704 - 100556 (+)
Gene ID: HRGMv2_4696_2_110
Type: peptidase
Location: 100633 - 101082 (-)
Gene ID: HRGMv2_4696_2_111
Type: CAZyme
Location: 101248 - 102147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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