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Cluster: HRGMv2_4696_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_1 HRGMv2_4696_1_872 913498 913896 + 1.A.77.2.6
TC HRGMv2_4696_1 HRGMv2_4696_1_873 914044 914793 + 3.A.2.1.7
TC HRGMv2_4696_1 HRGMv2_4696_1_874 914861 915088 + 3.A.2.1.7
TC HRGMv2_4696_1 HRGMv2_4696_1_875 915227 915844 + 3.A.2.1.7
TC HRGMv2_4696_1 HRGMv2_4696_1_876 915855 916334 + 3.A.2.1.7
STP HRGMv2_4696_1 HRGMv2_4696_1_877 916522 916827 - NUDIX
TF HRGMv2_4696_1 HRGMv2_4696_1_878 916856 917347 - 0040266
TC HRGMv2_4696_1 HRGMv2_4696_1_879 917559 918176 + 2.A.76.1.7
pfam HRGMv2_4696_1 HRGMv2_4696_1_880 918173 918760 - RNase_HII
pfam HRGMv2_4696_1 HRGMv2_4696_1_881 919032 920204 - Radical_SAM
CAZyme HRGMv2_4696_1 HRGMv2_4696_1_882 920425 920931 + GT2
Gene ID: HRGMv2_4696_1_872
Type: TC
Location: 913498 - 913896 (+)
Gene ID: HRGMv2_4696_1_873
Type: TC
Location: 914044 - 914793 (+)
Gene ID: HRGMv2_4696_1_874
Type: TC
Location: 914861 - 915088 (+)
Gene ID: HRGMv2_4696_1_875
Type: TC
Location: 915227 - 915844 (+)
Gene ID: HRGMv2_4696_1_876
Type: TC
Location: 915855 - 916334 (+)
Gene ID: HRGMv2_4696_1_877
Type: STP
Location: 916522 - 916827 (-)
Gene ID: HRGMv2_4696_1_878
Type: TF
Location: 916856 - 917347 (-)
Gene ID: HRGMv2_4696_1_879
Type: TC
Location: 917559 - 918176 (+)
Gene ID: HRGMv2_4696_1_880
Type: pfam
Location: 918173 - 918760 (-)
Gene ID: HRGMv2_4696_1_881
Type: pfam
Location: 919032 - 920204 (-)
Gene ID: HRGMv2_4696_1_882
Type: CAZyme
Location: 920425 - 920931 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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