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Cluster: HRGMv2_4696_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4696_1 HRGMv2_4696_1_28 34732 37902 - 2.A.6.2.25
TC HRGMv2_4696_1 HRGMv2_4696_1_29 37899 39158 - 2.A.6.2.25
TC HRGMv2_4696_1 HRGMv2_4696_1_30 39459 42203 - 3.A.3.6.26
TF HRGMv2_4696_1 HRGMv2_4696_1_31 42336 42725 - HTH_5
pfam HRGMv2_4696_1 HRGMv2_4696_1_32 43048 43314 + Glutaredoxin
TC HRGMv2_4696_1 HRGMv2_4696_1_33 43325 44341 + 5.B.1.3.2
NULL(UNKNOWN) HRGMv2_4696_1 HRGMv2_4696_1_34 44424 44672 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4696_1 HRGMv2_4696_1_35 44664 46115 - AA1
Gene ID: HRGMv2_4696_1_28
Type: TC
Location: 34732 - 37902 (-)
Gene ID: HRGMv2_4696_1_29
Type: TC
Location: 37899 - 39158 (-)
Gene ID: HRGMv2_4696_1_30
Type: TC
Location: 39459 - 42203 (-)
Gene ID: HRGMv2_4696_1_31
Type: TF
Location: 42336 - 42725 (-)
Gene ID: HRGMv2_4696_1_32
Type: pfam
Location: 43048 - 43314 (+)
Gene ID: HRGMv2_4696_1_33
Type: TC
Location: 43325 - 44341 (+)
Gene ID: HRGMv2_4696_1_34
Type:
Location: 44424 - 44672 (+)
Gene ID: HRGMv2_4696_1_35
Type: CAZyme
Location: 44664 - 46115 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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