Cluster: HRGMv2_4695_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4695
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4695_3 | HRGMv2_4695_3_35 | 38549 | 41026 | + | GH39 |
| NULL(UNKNOWN) | HRGMv2_4695_3 | HRGMv2_4695_3_36 | 41070 | 43220 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4695_3 | HRGMv2_4695_3_37 | 43252 | 44958 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4695_3 | HRGMv2_4695_3_38 | 45017 | 45472 | + | GH43_31 |
| CAZyme | HRGMv2_4695_3 | HRGMv2_4695_3_39 | 45462 | 45920 | + | GH43_31 |
| TC | HRGMv2_4695_3 | HRGMv2_4695_3_40 | 46067 | 47503 | + | 2.A.40.1.2 |
| TC | HRGMv2_4695_3 | HRGMv2_4695_3_41 | 48050 | 48259 | + | 2.A.64.4.1 |
Gene ID: HRGMv2_4695_3_35
Type: CAZyme
Location: 38549 - 41026 (+)
Type: CAZyme
Location: 38549 - 41026 (+)
Gene ID: HRGMv2_4695_3_36
Type:
Location: 41070 - 43220 (+)
Type:
Location: 41070 - 43220 (+)
Gene ID: HRGMv2_4695_3_37
Type:
Location: 43252 - 44958 (+)
Type:
Location: 43252 - 44958 (+)
Gene ID: HRGMv2_4695_3_38
Type: CAZyme
Location: 45017 - 45472 (+)
Type: CAZyme
Location: 45017 - 45472 (+)
Gene ID: HRGMv2_4695_3_39
Type: CAZyme
Location: 45462 - 45920 (+)
Type: CAZyme
Location: 45462 - 45920 (+)
Gene ID: HRGMv2_4695_3_40
Type: TC
Location: 46067 - 47503 (+)
Type: TC
Location: 46067 - 47503 (+)
Gene ID: HRGMv2_4695_3_41
Type: TC
Location: 48050 - 48259 (+)
Type: TC
Location: 48050 - 48259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1067
Species
UBA1067 sp934654805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.