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Cluster: HRGMv2_4695_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4695_41 HRGMv2_4695_41_9 9102 9974 - 3.A.11.1.3
pfam HRGMv2_4695_41 HRGMv2_4695_41_10 10032 11030 - NAD_Gly3P_dh_N | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
pfam HRGMv2_4695_41 HRGMv2_4695_41_11 11080 12432 - OATP | MFS_1
CAZyme HRGMv2_4695_41 HRGMv2_4695_41_12 12524 14317 - GH129
CAZyme HRGMv2_4695_41 HRGMv2_4695_41_13 14383 17439 - GH2
CAZyme HRGMv2_4695_41 HRGMv2_4695_41_14 17436 21062 - GH148 | PL27
NULL(UNKNOWN) HRGMv2_4695_41 HRGMv2_4695_41_15 21089 23752 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4695_41 HRGMv2_4695_41_16 23775 25310 - GH39
CAZyme HRGMv2_4695_41 HRGMv2_4695_41_17 25307 26515 - GH39
Gene ID: HRGMv2_4695_41_9
Type: TC
Location: 9102 - 9974 (-)
Gene ID: HRGMv2_4695_41_10
Type: pfam
Location: 10032 - 11030 (-)
Gene ID: HRGMv2_4695_41_11
Type: pfam
Location: 11080 - 12432 (-)
Gene ID: HRGMv2_4695_41_12
Type: CAZyme
Location: 12524 - 14317 (-)
Gene ID: HRGMv2_4695_41_13
Type: CAZyme
Location: 14383 - 17439 (-)
Gene ID: HRGMv2_4695_41_14
Type: CAZyme
Location: 17436 - 21062 (-)
Gene ID: HRGMv2_4695_41_15
Type:
Location: 21089 - 23752 (-)
Gene ID: HRGMv2_4695_41_16
Type: CAZyme
Location: 23775 - 25310 (-)
Gene ID: HRGMv2_4695_41_17
Type: CAZyme
Location: 25307 - 26515 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Verrucomicrobiota
→
Class
Kiritimatiellia
→
Order
RFP12
→
Family
UBA1067
→
Genus
UBA1067
→
Species
UBA1067 sp934654805

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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