Cluster: HRGMv2_4695_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4695
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4695_1 | HRGMv2_4695_1_22 | 31975 | 33351 | + | GH27 |
| STP | HRGMv2_4695_1 | HRGMv2_4695_1_23 | 33402 | 34571 | + | HTH_18 | Peripla_BP_3 |
| NULL(UNKNOWN) | HRGMv2_4695_1 | HRGMv2_4695_1_24 | 34738 | 37194 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4695_1 | HRGMv2_4695_1_25 | 37209 | 43406 | + | CE17 | GH148 | GH78 |
| CAZyme | HRGMv2_4695_1 | HRGMv2_4695_1_26 | 43579 | 45744 | + | GH97 |
| pfam | HRGMv2_4695_1 | HRGMv2_4695_1_27 | 45848 | 46060 | + | DDE_Tnp_ISL3 |
| TC | HRGMv2_4695_1 | HRGMv2_4695_1_28 | 46376 | 47290 | + | 3.A.1.5.37 |
Gene ID: HRGMv2_4695_1_22
Type: CAZyme
Location: 31975 - 33351 (+)
Type: CAZyme
Location: 31975 - 33351 (+)
Gene ID: HRGMv2_4695_1_23
Type: STP
Location: 33402 - 34571 (+)
Type: STP
Location: 33402 - 34571 (+)
Gene ID: HRGMv2_4695_1_24
Type:
Location: 34738 - 37194 (+)
Type:
Location: 34738 - 37194 (+)
Gene ID: HRGMv2_4695_1_25
Type: CAZyme
Location: 37209 - 43406 (+)
Type: CAZyme
Location: 37209 - 43406 (+)
Gene ID: HRGMv2_4695_1_26
Type: CAZyme
Location: 43579 - 45744 (+)
Type: CAZyme
Location: 43579 - 45744 (+)
Gene ID: HRGMv2_4695_1_27
Type: pfam
Location: 45848 - 46060 (+)
Type: pfam
Location: 45848 - 46060 (+)
Gene ID: HRGMv2_4695_1_28
Type: TC
Location: 46376 - 47290 (+)
Type: TC
Location: 46376 - 47290 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1067
Species
UBA1067 sp934654805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.