Cluster: HRGMv2_4695_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4695
- CGC Family ID: CGCFAM_00013
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4695_8 | HRGMv2_4695_8_29 | 27571 | 28461 | - | 9.B.1.1.6 |
| TC | HRGMv2_4695_8 | HRGMv2_4695_8_30 | 28555 | 29718 | - | 2.A.103.1.1 |
| pfam | HRGMv2_4695_8 | HRGMv2_4695_8_31 | 29725 | 30741 | - | LysM | LysM | LysM |
| pfam | HRGMv2_4695_8 | HRGMv2_4695_8_32 | 30738 | 31838 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_4695_8 | HRGMv2_4695_8_33 | 31839 | 33218 | - | CE7 |
Gene ID: HRGMv2_4695_8_29
Type: TC
Location: 27571 - 28461 (-)
Type: TC
Location: 27571 - 28461 (-)
Gene ID: HRGMv2_4695_8_30
Type: TC
Location: 28555 - 29718 (-)
Type: TC
Location: 28555 - 29718 (-)
Gene ID: HRGMv2_4695_8_31
Type: pfam
Location: 29725 - 30741 (-)
Type: pfam
Location: 29725 - 30741 (-)
Gene ID: HRGMv2_4695_8_32
Type: pfam
Location: 30738 - 31838 (-)
Type: pfam
Location: 30738 - 31838 (-)
Gene ID: HRGMv2_4695_8_33
Type: CAZyme
Location: 31839 - 33218 (-)
Type: CAZyme
Location: 31839 - 33218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1067
Species
UBA1067 sp934654805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.