Cluster: HRGMv2_4694_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4694
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4694_18 | HRGMv2_4694_18_37 | 47044 | 48426 | + | 2.A.1.1.55 |
| CAZyme | HRGMv2_4694_18 | HRGMv2_4694_18_38 | 48423 | 49958 | + | CE20 |
| pfam | HRGMv2_4694_18 | HRGMv2_4694_18_39 | 50146 | 50688 | + | IF3_C | IF3_N |
| pfam | HRGMv2_4694_18 | HRGMv2_4694_18_40 | 50752 | 51249 | + | YgbB |
| CAZyme | HRGMv2_4694_18 | HRGMv2_4694_18_41 | 51255 | 52310 | + | GT2 |
Gene ID: HRGMv2_4694_18_37
Type: TC
Location: 47044 - 48426 (+)
Type: TC
Location: 47044 - 48426 (+)
Gene ID: HRGMv2_4694_18_38
Type: CAZyme
Location: 48423 - 49958 (+)
Type: CAZyme
Location: 48423 - 49958 (+)
Gene ID: HRGMv2_4694_18_39
Type: pfam
Location: 50146 - 50688 (+)
Type: pfam
Location: 50146 - 50688 (+)
Gene ID: HRGMv2_4694_18_40
Type: pfam
Location: 50752 - 51249 (+)
Type: pfam
Location: 50752 - 51249 (+)
Gene ID: HRGMv2_4694_18_41
Type: CAZyme
Location: 51255 - 52310 (+)
Type: CAZyme
Location: 51255 - 52310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1731
Species
UBA1731 sp934667425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.