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Cluster: HRGMv2_4691_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_38 49385 51202 - GT26 | GT4
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_39 51199 53190 - GT2 | GT4
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_40 53187 54350 - GT4
pfam HRGMv2_4691_7 HRGMv2_4691_7_41 54350 55519 - Phosphodiest
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_42 55516 57744 - GH9
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_43 57741 58835 - GT2
TC HRGMv2_4691_7 HRGMv2_4691_7_44 58832 60367 - 2.A.66.1.40
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_45 60364 61449 - GT2
CAZyme HRGMv2_4691_7 HRGMv2_4691_7_46 61436 62494 - GT2
Gene ID: HRGMv2_4691_7_38
Type: CAZyme
Location: 49385 - 51202 (-)
Gene ID: HRGMv2_4691_7_39
Type: CAZyme
Location: 51199 - 53190 (-)
Gene ID: HRGMv2_4691_7_40
Type: CAZyme
Location: 53187 - 54350 (-)
Gene ID: HRGMv2_4691_7_41
Type: pfam
Location: 54350 - 55519 (-)
Gene ID: HRGMv2_4691_7_42
Type: CAZyme
Location: 55516 - 57744 (-)
Gene ID: HRGMv2_4691_7_43
Type: CAZyme
Location: 57741 - 58835 (-)
Gene ID: HRGMv2_4691_7_44
Type: TC
Location: 58832 - 60367 (-)
Gene ID: HRGMv2_4691_7_45
Type: CAZyme
Location: 60364 - 61449 (-)
Gene ID: HRGMv2_4691_7_46
Type: CAZyme
Location: 61436 - 62494 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Verrucomicrobiota
→
Class
Kiritimatiellia
→
Order
RFP12
→
Family
UBA1067
→
Genus
UBA1067
→
Species
UBA1067 sp934621385

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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