Cluster: HRGMv2_4691_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4691
- CGC Family ID: CGCFAM_00708
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4691_20 | HRGMv2_4691_20_26 | 30820 | 32652 | + | GH50 |
| TC | HRGMv2_4691_20 | HRGMv2_4691_20_27 | 33058 | 34488 | + | 2.A.66.1.32 |
| pfam | HRGMv2_4691_20 | HRGMv2_4691_20_28 | 34602 | 35387 | + | NTP_transferase | NTP_transf_3 |
| pfam | HRGMv2_4691_20 | HRGMv2_4691_20_29 | 35394 | 36644 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_4691_20 | HRGMv2_4691_20_30 | 36663 | 37658 | + | GT2 |
| CAZyme | HRGMv2_4691_20 | HRGMv2_4691_20_31 | 37655 | 38728 | + | GT8 |
Gene ID: HRGMv2_4691_20_26
Type: CAZyme
Location: 30820 - 32652 (+)
Type: CAZyme
Location: 30820 - 32652 (+)
Gene ID: HRGMv2_4691_20_27
Type: TC
Location: 33058 - 34488 (+)
Type: TC
Location: 33058 - 34488 (+)
Gene ID: HRGMv2_4691_20_28
Type: pfam
Location: 34602 - 35387 (+)
Type: pfam
Location: 34602 - 35387 (+)
Gene ID: HRGMv2_4691_20_29
Type: pfam
Location: 35394 - 36644 (+)
Type: pfam
Location: 35394 - 36644 (+)
Gene ID: HRGMv2_4691_20_30
Type: CAZyme
Location: 36663 - 37658 (+)
Type: CAZyme
Location: 36663 - 37658 (+)
Gene ID: HRGMv2_4691_20_31
Type: CAZyme
Location: 37655 - 38728 (+)
Type: CAZyme
Location: 37655 - 38728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1067
Species
UBA1067 sp934621385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.