Cluster: HRGMv2_4691_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4691
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4691_12 | HRGMv2_4691_12_33 | 46328 | 47584 | + | 9.A.40.2.1 |
| pfam | HRGMv2_4691_12 | HRGMv2_4691_12_34 | 47581 | 48222 | + | CNNM |
| CAZyme | HRGMv2_4691_12 | HRGMv2_4691_12_35 | 48253 | 51939 | + | GH106 |
| pfam | HRGMv2_4691_12 | HRGMv2_4691_12_36 | 52160 | 52501 | + | P-II |
| TC | HRGMv2_4691_12 | HRGMv2_4691_12_37 | 52530 | 53882 | + | 1.A.11.2.7 |
Gene ID: HRGMv2_4691_12_33
Type: TC
Location: 46328 - 47584 (+)
Type: TC
Location: 46328 - 47584 (+)
Gene ID: HRGMv2_4691_12_34
Type: pfam
Location: 47581 - 48222 (+)
Type: pfam
Location: 47581 - 48222 (+)
Gene ID: HRGMv2_4691_12_35
Type: CAZyme
Location: 48253 - 51939 (+)
Type: CAZyme
Location: 48253 - 51939 (+)
Gene ID: HRGMv2_4691_12_36
Type: pfam
Location: 52160 - 52501 (+)
Type: pfam
Location: 52160 - 52501 (+)
Gene ID: HRGMv2_4691_12_37
Type: TC
Location: 52530 - 53882 (+)
Type: TC
Location: 52530 - 53882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
UBA1067
Species
UBA1067 sp934621385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.