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Cluster: HRGMv2_4691_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4691_9 HRGMv2_4691_9_35 36423 37466 + GT4
CAZyme HRGMv2_4691_9 HRGMv2_4691_9_36 37468 38571 + GT4
NULL(UNKNOWN) HRGMv2_4691_9 HRGMv2_4691_9_37 39242 39622 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4691_9 HRGMv2_4691_9_38 39677 40795 - Aminotran_1_2
CAZyme HRGMv2_4691_9 HRGMv2_4691_9_39 40792 41895 - GT4
TC HRGMv2_4691_9 HRGMv2_4691_9_40 41907 43382 - 4.C.1.1.4
pfam HRGMv2_4691_9 HRGMv2_4691_9_41 43369 44049 - AICARFT_IMPCHas | MGS
CAZyme HRGMv2_4691_9 HRGMv2_4691_9_42 44164 46062 - GH2
Gene ID: HRGMv2_4691_9_35
Type: CAZyme
Location: 36423 - 37466 (+)
Gene ID: HRGMv2_4691_9_36
Type: CAZyme
Location: 37468 - 38571 (+)
Gene ID: HRGMv2_4691_9_37
Type:
Location: 39242 - 39622 (-)
Gene ID: HRGMv2_4691_9_38
Type: STP
Location: 39677 - 40795 (-)
Gene ID: HRGMv2_4691_9_39
Type: CAZyme
Location: 40792 - 41895 (-)
Gene ID: HRGMv2_4691_9_40
Type: TC
Location: 41907 - 43382 (-)
Gene ID: HRGMv2_4691_9_41
Type: pfam
Location: 43369 - 44049 (-)
Gene ID: HRGMv2_4691_9_42
Type: CAZyme
Location: 44164 - 46062 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Verrucomicrobiota
→
Class
Kiritimatiellia
→
Order
RFP12
→
Family
UBA1067
→
Genus
UBA1067
→
Species
UBA1067 sp934621385

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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