Cluster: HRGMv2_4690_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4690
- CGC Family ID: CGCFAM_02507
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4690_13 | HRGMv2_4690_13_2 | 1638 | 2570 | + | 3.A.1.1.20 |
| TC | HRGMv2_4690_13 | HRGMv2_4690_13_3 | 2573 | 3511 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_4690_13 | HRGMv2_4690_13_4 | 3511 | 5487 | + | GH43 |
| NULL(UNKNOWN) | HRGMv2_4690_13 | HRGMv2_4690_13_5 | 5484 | 5615 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4690_13 | HRGMv2_4690_13_6 | 5612 | 7465 | + | CBM9_1 |
| CAZyme | HRGMv2_4690_13 | HRGMv2_4690_13_7 | 7478 | 9880 | + | GH43_32 |
Gene ID: HRGMv2_4690_13_2
Type: TC
Location: 1638 - 2570 (+)
Type: TC
Location: 1638 - 2570 (+)
Gene ID: HRGMv2_4690_13_3
Type: TC
Location: 2573 - 3511 (+)
Type: TC
Location: 2573 - 3511 (+)
Gene ID: HRGMv2_4690_13_4
Type: CAZyme
Location: 3511 - 5487 (+)
Type: CAZyme
Location: 3511 - 5487 (+)
Gene ID: HRGMv2_4690_13_5
Type:
Location: 5484 - 5615 (+)
Type:
Location: 5484 - 5615 (+)
Gene ID: HRGMv2_4690_13_6
Type: pfam
Location: 5612 - 7465 (+)
Type: pfam
Location: 5612 - 7465 (+)
Gene ID: HRGMv2_4690_13_7
Type: CAZyme
Location: 7478 - 9880 (+)
Type: CAZyme
Location: 7478 - 9880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.