Cluster: HRGMv2_4690_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4690
- CGC Family ID: CGCFAM_01635
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4690_10 | HRGMv2_4690_10_2 | 1931 | 3460 | + | 3.A.1.1.27 |
| TC | HRGMv2_4690_10 | HRGMv2_4690_10_3 | 3460 | 4395 | + | 3.A.1.1.27 |
| TC | HRGMv2_4690_10 | HRGMv2_4690_10_4 | 4408 | 5550 | + | 3.A.1.1.26 |
| CAZyme | HRGMv2_4690_10 | HRGMv2_4690_10_5 | 5627 | 7801 | + | CBM61 | GH53 |
Gene ID: HRGMv2_4690_10_2
Type: TC
Location: 1931 - 3460 (+)
Type: TC
Location: 1931 - 3460 (+)
Gene ID: HRGMv2_4690_10_3
Type: TC
Location: 3460 - 4395 (+)
Type: TC
Location: 3460 - 4395 (+)
Gene ID: HRGMv2_4690_10_4
Type: TC
Location: 4408 - 5550 (+)
Type: TC
Location: 4408 - 5550 (+)
Gene ID: HRGMv2_4690_10_5
Type: CAZyme
Location: 5627 - 7801 (+)
Type: CAZyme
Location: 5627 - 7801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.