Cluster: HRGMv2_4690_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4690
- CGC Family ID: CGCFAM_04299
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4690_5 | HRGMv2_4690_5_27 | 26909 | 27931 | + | GT4 |
| CAZyme | HRGMv2_4690_5 | HRGMv2_4690_5_28 | 27957 | 28700 | + | GT32 |
| pfam | HRGMv2_4690_5 | HRGMv2_4690_5_29 | 28735 | 29820 | + | EpsG |
| CAZyme | HRGMv2_4690_5 | HRGMv2_4690_5_30 | 29829 | 30626 | + | GT111 |
| TC | HRGMv2_4690_5 | HRGMv2_4690_5_31 | 30755 | 32263 | + | 2.A.66.2.16 |
| NULL(UNKNOWN) | HRGMv2_4690_5 | HRGMv2_4690_5_32 | 32256 | 34097 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4690_5 | HRGMv2_4690_5_33 | 34105 | 35253 | + | GT4 |
Gene ID: HRGMv2_4690_5_27
Type: CAZyme
Location: 26909 - 27931 (+)
Type: CAZyme
Location: 26909 - 27931 (+)
Gene ID: HRGMv2_4690_5_28
Type: CAZyme
Location: 27957 - 28700 (+)
Type: CAZyme
Location: 27957 - 28700 (+)
Gene ID: HRGMv2_4690_5_29
Type: pfam
Location: 28735 - 29820 (+)
Type: pfam
Location: 28735 - 29820 (+)
Gene ID: HRGMv2_4690_5_30
Type: CAZyme
Location: 29829 - 30626 (+)
Type: CAZyme
Location: 29829 - 30626 (+)
Gene ID: HRGMv2_4690_5_31
Type: TC
Location: 30755 - 32263 (+)
Type: TC
Location: 30755 - 32263 (+)
Gene ID: HRGMv2_4690_5_32
Type:
Location: 32256 - 34097 (+)
Type:
Location: 32256 - 34097 (+)
Gene ID: HRGMv2_4690_5_33
Type: CAZyme
Location: 34105 - 35253 (+)
Type: CAZyme
Location: 34105 - 35253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.