Cluster: HRGMv2_4690_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4690
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4690_4 | HRGMv2_4690_4_24 | 23494 | 24327 | - | 2.A.36.2.1 |
| pfam | HRGMv2_4690_4 | HRGMv2_4690_4_25 | 24482 | 25261 | - | adh_short | Polysacc_synt_2 | KR | adh_short_C2 |
| CAZyme | HRGMv2_4690_4 | HRGMv2_4690_4_26 | 25533 | 27848 | - | GH36 |
| CAZyme | HRGMv2_4690_4 | HRGMv2_4690_4_27 | 27906 | 30239 | + | GH2 |
| pfam | HRGMv2_4690_4 | HRGMv2_4690_4_28 | 30294 | 31328 | - | DUF2804 |
| pfam | HRGMv2_4690_4 | HRGMv2_4690_4_29 | 31452 | 32798 | + | LPG_synthase_TM |
| TC | HRGMv2_4690_4 | HRGMv2_4690_4_30 | 32825 | 33694 | - | 2.A.7.2.1 |
Gene ID: HRGMv2_4690_4_24
Type: TC
Location: 23494 - 24327 (-)
Type: TC
Location: 23494 - 24327 (-)
Gene ID: HRGMv2_4690_4_25
Type: pfam
Location: 24482 - 25261 (-)
Type: pfam
Location: 24482 - 25261 (-)
Gene ID: HRGMv2_4690_4_26
Type: CAZyme
Location: 25533 - 27848 (-)
Type: CAZyme
Location: 25533 - 27848 (-)
Gene ID: HRGMv2_4690_4_27
Type: CAZyme
Location: 27906 - 30239 (+)
Type: CAZyme
Location: 27906 - 30239 (+)
Gene ID: HRGMv2_4690_4_28
Type: pfam
Location: 30294 - 31328 (-)
Type: pfam
Location: 30294 - 31328 (-)
Gene ID: HRGMv2_4690_4_29
Type: pfam
Location: 31452 - 32798 (+)
Type: pfam
Location: 31452 - 32798 (+)
Gene ID: HRGMv2_4690_4_30
Type: TC
Location: 32825 - 33694 (-)
Type: TC
Location: 32825 - 33694 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.