Cluster: HRGMv2_4690_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4690
- CGC Family ID: CGCFAM_04653
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4690_20 | HRGMv2_4690_20_17 | 18096 | 18500 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | HRGMv2_4690_20 | HRGMv2_4690_20_18 | 18588 | 19109 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4690_20 | HRGMv2_4690_20_19 | 19106 | 20728 | + | GH13_36 |
| CAZyme | HRGMv2_4690_20 | HRGMv2_4690_20_20 | 20788 | 23436 | + | CBM41 | GH13_14 |
Gene ID: HRGMv2_4690_20_17
Type: TC
Location: 18096 - 18500 (+)
Type: TC
Location: 18096 - 18500 (+)
Gene ID: HRGMv2_4690_20_18
Type:
Location: 18588 - 19109 (+)
Type:
Location: 18588 - 19109 (+)
Gene ID: HRGMv2_4690_20_19
Type: CAZyme
Location: 19106 - 20728 (+)
Type: CAZyme
Location: 19106 - 20728 (+)
Gene ID: HRGMv2_4690_20_20
Type: CAZyme
Location: 20788 - 23436 (+)
Type: CAZyme
Location: 20788 - 23436 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.