Cluster: HRGMv2_4690_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4690
- CGC Family ID: CGCFAM_02508
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4690_2 | HRGMv2_4690_2_17 | 19344 | 21113 | + | GH43_33 |
| STP | HRGMv2_4690_2 | HRGMv2_4690_2_18 | 21129 | 22637 | + | SBP_bac_1 |
| TC | HRGMv2_4690_2 | HRGMv2_4690_2_19 | 22641 | 23657 | + | 3.A.1.1.4 |
| TC | HRGMv2_4690_2 | HRGMv2_4690_2_20 | 23657 | 24634 | + | 3.A.1.1.36 |
| TC | HRGMv2_4690_2 | HRGMv2_4690_2_21 | 24645 | 26294 | + | 3.A.1.1.26 |
| pfam | HRGMv2_4690_2 | HRGMv2_4690_2_22 | 26270 | 27295 | + | Lipase_GDSL_2 |
| CAZyme | HRGMv2_4690_2 | HRGMv2_4690_2_23 | 27295 | 29421 | + | GH36 |
| CAZyme | HRGMv2_4690_2 | HRGMv2_4690_2_24 | 29423 | 31171 | + | GH2 |
Gene ID: HRGMv2_4690_2_17
Type: CAZyme
Location: 19344 - 21113 (+)
Type: CAZyme
Location: 19344 - 21113 (+)
Gene ID: HRGMv2_4690_2_18
Type: STP
Location: 21129 - 22637 (+)
Type: STP
Location: 21129 - 22637 (+)
Gene ID: HRGMv2_4690_2_19
Type: TC
Location: 22641 - 23657 (+)
Type: TC
Location: 22641 - 23657 (+)
Gene ID: HRGMv2_4690_2_20
Type: TC
Location: 23657 - 24634 (+)
Type: TC
Location: 23657 - 24634 (+)
Gene ID: HRGMv2_4690_2_21
Type: TC
Location: 24645 - 26294 (+)
Type: TC
Location: 24645 - 26294 (+)
Gene ID: HRGMv2_4690_2_22
Type: pfam
Location: 26270 - 27295 (+)
Type: pfam
Location: 26270 - 27295 (+)
Gene ID: HRGMv2_4690_2_23
Type: CAZyme
Location: 27295 - 29421 (+)
Type: CAZyme
Location: 27295 - 29421 (+)
Gene ID: HRGMv2_4690_2_24
Type: CAZyme
Location: 29423 - 31171 (+)
Type: CAZyme
Location: 29423 - 31171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.