Cluster: HRGMv2_4689_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4689
- CGC Family ID: CGCFAM_06995
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4689_5 | HRGMv2_4689_5_22 | 30661 | 32706 | - | GH65 |
| CAZyme | HRGMv2_4689_5 | HRGMv2_4689_5_23 | 32687 | 34939 | - | GH65 |
| TC | HRGMv2_4689_5 | HRGMv2_4689_5_24 | 34942 | 35850 | - | 3.A.1.1.30 |
| TC | HRGMv2_4689_5 | HRGMv2_4689_5_25 | 35847 | 36788 | - | 3.A.1.1.33 |
| STP | HRGMv2_4689_5 | HRGMv2_4689_5_26 | 36785 | 38191 | - | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_4689_5 | HRGMv2_4689_5_27 | 38294 | 39220 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4689_5 | HRGMv2_4689_5_28 | 39186 | 40820 | - | 8.A.59.2.1 |
| TF | HRGMv2_4689_5 | HRGMv2_4689_5_29 | 40810 | 42030 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4689_5 | HRGMv2_4689_5_30 | 42101 | 45112 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4689_5 | HRGMv2_4689_5_31 | 45126 | 47756 | - | GH28 |
| CAZyme | HRGMv2_4689_5 | HRGMv2_4689_5_32 | 47917 | 49623 | - | GH28 |
| TC | HRGMv2_4689_5 | HRGMv2_4689_5_33 | 49620 | 51161 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_4689_5_22
Type: CAZyme
Location: 30661 - 32706 (-)
Type: CAZyme
Location: 30661 - 32706 (-)
Gene ID: HRGMv2_4689_5_23
Type: CAZyme
Location: 32687 - 34939 (-)
Type: CAZyme
Location: 32687 - 34939 (-)
Gene ID: HRGMv2_4689_5_24
Type: TC
Location: 34942 - 35850 (-)
Type: TC
Location: 34942 - 35850 (-)
Gene ID: HRGMv2_4689_5_25
Type: TC
Location: 35847 - 36788 (-)
Type: TC
Location: 35847 - 36788 (-)
Gene ID: HRGMv2_4689_5_26
Type: STP
Location: 36785 - 38191 (-)
Type: STP
Location: 36785 - 38191 (-)
Gene ID: HRGMv2_4689_5_27
Type:
Location: 38294 - 39220 (+)
Type:
Location: 38294 - 39220 (+)
Gene ID: HRGMv2_4689_5_28
Type: TC
Location: 39186 - 40820 (-)
Type: TC
Location: 39186 - 40820 (-)
Gene ID: HRGMv2_4689_5_29
Type: TF
Location: 40810 - 42030 (-)
Type: TF
Location: 40810 - 42030 (-)
Gene ID: HRGMv2_4689_5_30
Type:
Location: 42101 - 45112 (-)
Type:
Location: 42101 - 45112 (-)
Gene ID: HRGMv2_4689_5_31
Type: CAZyme
Location: 45126 - 47756 (-)
Type: CAZyme
Location: 45126 - 47756 (-)
Gene ID: HRGMv2_4689_5_32
Type: CAZyme
Location: 47917 - 49623 (-)
Type: CAZyme
Location: 47917 - 49623 (-)
Gene ID: HRGMv2_4689_5_33
Type: TC
Location: 49620 - 51161 (-)
Type: TC
Location: 49620 - 51161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Species
UBA4951 sp944375905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.