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Cluster: HRGMv2_4689_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4689_4 HRGMv2_4689_4_1 85 3237 - CE2
CAZyme HRGMv2_4689_4 HRGMv2_4689_4_2 3258 6182 - CE2
CAZyme HRGMv2_4689_4 HRGMv2_4689_4_3 6172 7554 - GH30_1
CAZyme HRGMv2_4689_4 HRGMv2_4689_4_4 7567 10116 - GH30_3
TC HRGMv2_4689_4 HRGMv2_4689_4_5 10116 11006 - 3.A.1.1.20
TC HRGMv2_4689_4 HRGMv2_4689_4_6 10957 11934 - 3.A.1.1.4
TC HRGMv2_4689_4 HRGMv2_4689_4_7 11944 13254 - 3.A.1.1.16
TF HRGMv2_4689_4 HRGMv2_4689_4_8 13291 14247 - LacI
TC HRGMv2_4689_4 HRGMv2_4689_4_9 14335 15810 + 3.A.1.1.28
Gene ID: HRGMv2_4689_4_1
Type: CAZyme
Location: 85 - 3237 (-)
Gene ID: HRGMv2_4689_4_2
Type: CAZyme
Location: 3258 - 6182 (-)
Gene ID: HRGMv2_4689_4_3
Type: CAZyme
Location: 6172 - 7554 (-)
Gene ID: HRGMv2_4689_4_4
Type: CAZyme
Location: 7567 - 10116 (-)
Gene ID: HRGMv2_4689_4_5
Type: TC
Location: 10116 - 11006 (-)
Gene ID: HRGMv2_4689_4_6
Type: TC
Location: 10957 - 11934 (-)
Gene ID: HRGMv2_4689_4_7
Type: TC
Location: 11944 - 13254 (-)
Gene ID: HRGMv2_4689_4_8
Type: TF
Location: 13291 - 14247 (-)
Gene ID: HRGMv2_4689_4_9
Type: TC
Location: 14335 - 15810 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
UBA4951
→
Species
UBA4951 sp944375905

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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