Cluster: HRGMv2_4689_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4689
- CGC Family ID: CGCFAM_02003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4689_3 | HRGMv2_4689_3_37 | 47962 | 49320 | - | 3.A.1.1.26 |
| pfam | HRGMv2_4689_3 | HRGMv2_4689_3_38 | 49558 | 50127 | - | HTH_30 |
| CAZyme | HRGMv2_4689_3 | HRGMv2_4689_3_39 | 50127 | 51821 | - | GH13_31 |
| TC | HRGMv2_4689_3 | HRGMv2_4689_3_40 | 52034 | 53830 | + | 3.A.1.106.8 |
| TC | HRGMv2_4689_3 | HRGMv2_4689_3_41 | 53827 | 55761 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4689_3_37
Type: TC
Location: 47962 - 49320 (-)
Type: TC
Location: 47962 - 49320 (-)
Gene ID: HRGMv2_4689_3_38
Type: pfam
Location: 49558 - 50127 (-)
Type: pfam
Location: 49558 - 50127 (-)
Gene ID: HRGMv2_4689_3_39
Type: CAZyme
Location: 50127 - 51821 (-)
Type: CAZyme
Location: 50127 - 51821 (-)
Gene ID: HRGMv2_4689_3_40
Type: TC
Location: 52034 - 53830 (+)
Type: TC
Location: 52034 - 53830 (+)
Gene ID: HRGMv2_4689_3_41
Type: TC
Location: 53827 - 55761 (+)
Type: TC
Location: 53827 - 55761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Species
UBA4951 sp944375905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.