Cluster: HRGMv2_4689_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4689
- CGC Family ID: CGCFAM_00117
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4689_2 | HRGMv2_4689_2_2 | 1847 | 4957 | + | 3.A.1.1.27 |
| TC | HRGMv2_4689_2 | HRGMv2_4689_2_3 | 4957 | 5892 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_4689_2 | HRGMv2_4689_2_4 | 6047 | 7636 | + | GH13_36 |
| CAZyme | HRGMv2_4689_2 | HRGMv2_4689_2_5 | 7633 | 10719 | + | GH13_14 |
| CAZyme | HRGMv2_4689_2 | HRGMv2_4689_2_6 | 10719 | 13391 | + | GH13_36 |
Gene ID: HRGMv2_4689_2_2
Type: TC
Location: 1847 - 4957 (+)
Type: TC
Location: 1847 - 4957 (+)
Gene ID: HRGMv2_4689_2_3
Type: TC
Location: 4957 - 5892 (+)
Type: TC
Location: 4957 - 5892 (+)
Gene ID: HRGMv2_4689_2_4
Type: CAZyme
Location: 6047 - 7636 (+)
Type: CAZyme
Location: 6047 - 7636 (+)
Gene ID: HRGMv2_4689_2_5
Type: CAZyme
Location: 7633 - 10719 (+)
Type: CAZyme
Location: 7633 - 10719 (+)
Gene ID: HRGMv2_4689_2_6
Type: CAZyme
Location: 10719 - 13391 (+)
Type: CAZyme
Location: 10719 - 13391 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Species
UBA4951 sp944375905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.