Cluster: HRGMv2_4689_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4689
- CGC Family ID: CGCFAM_00037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4689_14 | HRGMv2_4689_14_11 | 12796 | 14493 | + | CBM34 | GH13_20 |
| TC | HRGMv2_4689_14 | HRGMv2_4689_14_12 | 14490 | 15983 | + | 3.A.1.1.6 |
| TC | HRGMv2_4689_14 | HRGMv2_4689_14_13 | 15994 | 17430 | + | 3.A.1.1.27 |
| TC | HRGMv2_4689_14 | HRGMv2_4689_14_14 | 17427 | 18260 | + | 3.A.1.1.6 |
| TC | HRGMv2_4689_14 | HRGMv2_4689_14_15 | 18263 | 19960 | + | 3.A.1.1.22 |
| CAZyme | HRGMv2_4689_14 | HRGMv2_4689_14_16 | 19996 | 21687 | + | CBM34 | GH13_20 |
| TC | HRGMv2_4689_14 | HRGMv2_4689_14_17 | 21725 | 23095 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_4689_14_11
Type: CAZyme
Location: 12796 - 14493 (+)
Type: CAZyme
Location: 12796 - 14493 (+)
Gene ID: HRGMv2_4689_14_12
Type: TC
Location: 14490 - 15983 (+)
Type: TC
Location: 14490 - 15983 (+)
Gene ID: HRGMv2_4689_14_13
Type: TC
Location: 15994 - 17430 (+)
Type: TC
Location: 15994 - 17430 (+)
Gene ID: HRGMv2_4689_14_14
Type: TC
Location: 17427 - 18260 (+)
Type: TC
Location: 17427 - 18260 (+)
Gene ID: HRGMv2_4689_14_15
Type: TC
Location: 18263 - 19960 (+)
Type: TC
Location: 18263 - 19960 (+)
Gene ID: HRGMv2_4689_14_16
Type: CAZyme
Location: 19996 - 21687 (+)
Type: CAZyme
Location: 19996 - 21687 (+)
Gene ID: HRGMv2_4689_14_17
Type: TC
Location: 21725 - 23095 (-)
Type: TC
Location: 21725 - 23095 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
UBA4951
Species
UBA4951 sp944375905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.