Cluster: HRGMv2_4688_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4688
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4688_12 | HRGMv2_4688_12_8 | 8345 | 9535 | - | 3.A.1.1.26 |
| TC | HRGMv2_4688_12 | HRGMv2_4688_12_9 | 9520 | 10047 | - | 3.A.1.1.22 |
| TC | HRGMv2_4688_12 | HRGMv2_4688_12_10 | 10052 | 10888 | - | 3.A.1.1.27 |
| TC | HRGMv2_4688_12 | HRGMv2_4688_12_11 | 10885 | 12243 | - | 3.A.1.1.27 |
| TC | HRGMv2_4688_12 | HRGMv2_4688_12_12 | 12245 | 13705 | - | 3.A.1.1.26 |
| CAZyme | HRGMv2_4688_12 | HRGMv2_4688_12_13 | 13695 | 15380 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_4688_12_8
Type: TC
Location: 8345 - 9535 (-)
Type: TC
Location: 8345 - 9535 (-)
Gene ID: HRGMv2_4688_12_9
Type: TC
Location: 9520 - 10047 (-)
Type: TC
Location: 9520 - 10047 (-)
Gene ID: HRGMv2_4688_12_10
Type: TC
Location: 10052 - 10888 (-)
Type: TC
Location: 10052 - 10888 (-)
Gene ID: HRGMv2_4688_12_11
Type: TC
Location: 10885 - 12243 (-)
Type: TC
Location: 10885 - 12243 (-)
Gene ID: HRGMv2_4688_12_12
Type: TC
Location: 12245 - 13705 (-)
Type: TC
Location: 12245 - 13705 (-)
Gene ID: HRGMv2_4688_12_13
Type: CAZyme
Location: 13695 - 15380 (-)
Type: CAZyme
Location: 13695 - 15380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
CAJOOD01
Species
CAJOOD01 sp019421105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.