Cluster: HRGMv2_4688_CGC5
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4688
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4688_7 | HRGMv2_4688_7_12 | 9923 | 10639 | + | GT2 |
| pfam | HRGMv2_4688_7 | HRGMv2_4688_7_13 | 10639 | 11529 | + | PAP2 |
| pfam | HRGMv2_4688_7 | HRGMv2_4688_7_14 | 11580 | 12761 | + | Lactamase_B | ODP |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_15 | 12775 | 14484 | + | 4.C.1.1.4 |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_16 | 14607 | 15899 | + | 3.D.6.1.1 |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_17 | 15896 | 17008 | + | 3.D.6.1.4 |
| NULL(UNKNOWN) | HRGMv2_4688_7 | HRGMv2_4688_7_18 | 17001 | 18728 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_19 | 18739 | 19485 | + | 3.D.6.1.2 |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_20 | 19488 | 20075 | + | 3.D.6.1.4 |
| NULL(UNKNOWN) | HRGMv2_4688_7 | HRGMv2_4688_7_21 | 20078 | 20278 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_22 | 20285 | 20599 | + | 3.D.6.1.4 |
| pfam | HRGMv2_4688_7 | HRGMv2_4688_7_23 | 20603 | 21574 | + | ApbE |
| pfam | HRGMv2_4688_7 | HRGMv2_4688_7_24 | 21522 | 21956 | + | NusG_II |
| TC | HRGMv2_4688_7 | HRGMv2_4688_7_25 | 21958 | 22476 | + | 2.A.87.3.3 |
Gene ID: HRGMv2_4688_7_12
Type: CAZyme
Location: 9923 - 10639 (+)
Type: CAZyme
Location: 9923 - 10639 (+)
Gene ID: HRGMv2_4688_7_13
Type: pfam
Location: 10639 - 11529 (+)
Type: pfam
Location: 10639 - 11529 (+)
Gene ID: HRGMv2_4688_7_14
Type: pfam
Location: 11580 - 12761 (+)
Type: pfam
Location: 11580 - 12761 (+)
Gene ID: HRGMv2_4688_7_15
Type: TC
Location: 12775 - 14484 (+)
Type: TC
Location: 12775 - 14484 (+)
Gene ID: HRGMv2_4688_7_16
Type: TC
Location: 14607 - 15899 (+)
Type: TC
Location: 14607 - 15899 (+)
Gene ID: HRGMv2_4688_7_17
Type: TC
Location: 15896 - 17008 (+)
Type: TC
Location: 15896 - 17008 (+)
Gene ID: HRGMv2_4688_7_18
Type:
Location: 17001 - 18728 (+)
Type:
Location: 17001 - 18728 (+)
Gene ID: HRGMv2_4688_7_19
Type: TC
Location: 18739 - 19485 (+)
Type: TC
Location: 18739 - 19485 (+)
Gene ID: HRGMv2_4688_7_20
Type: TC
Location: 19488 - 20075 (+)
Type: TC
Location: 19488 - 20075 (+)
Gene ID: HRGMv2_4688_7_21
Type:
Location: 20078 - 20278 (+)
Type:
Location: 20078 - 20278 (+)
Gene ID: HRGMv2_4688_7_22
Type: TC
Location: 20285 - 20599 (+)
Type: TC
Location: 20285 - 20599 (+)
Gene ID: HRGMv2_4688_7_23
Type: pfam
Location: 20603 - 21574 (+)
Type: pfam
Location: 20603 - 21574 (+)
Gene ID: HRGMv2_4688_7_24
Type: pfam
Location: 21522 - 21956 (+)
Type: pfam
Location: 21522 - 21956 (+)
Gene ID: HRGMv2_4688_7_25
Type: TC
Location: 21958 - 22476 (+)
Type: TC
Location: 21958 - 22476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
CAJOOD01
Species
CAJOOD01 sp019421105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.