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Cluster: HRGMv2_4688_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4688_1 HRGMv2_4688_1_1 1 1362 - 3.A.1.1.46
TF HRGMv2_4688_1 HRGMv2_4688_1_2 1452 2414 + LacI
TC HRGMv2_4688_1 HRGMv2_4688_1_3 2434 3705 + 3.A.1.1.2
TC HRGMv2_4688_1 HRGMv2_4688_1_4 3707 4678 + 3.A.1.1.20
TC HRGMv2_4688_1 HRGMv2_4688_1_5 4629 5519 + 3.A.1.1.20
CAZyme HRGMv2_4688_1 HRGMv2_4688_1_6 5521 8049 + GH30_3
CAZyme HRGMv2_4688_1 HRGMv2_4688_1_7 8060 9388 + GH30_1
NULL(UNKNOWN) HRGMv2_4688_1 HRGMv2_4688_1_8 9402 10493 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4688_1 HRGMv2_4688_1_9 10511 11668 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4688_1 HRGMv2_4688_1_10 11734 13695 + GH30_3
Gene ID: HRGMv2_4688_1_1
Type: TC
Location: 1 - 1362 (-)
Gene ID: HRGMv2_4688_1_2
Type: TF
Location: 1452 - 2414 (+)
Gene ID: HRGMv2_4688_1_3
Type: TC
Location: 2434 - 3705 (+)
Gene ID: HRGMv2_4688_1_4
Type: TC
Location: 3707 - 4678 (+)
Gene ID: HRGMv2_4688_1_5
Type: TC
Location: 4629 - 5519 (+)
Gene ID: HRGMv2_4688_1_6
Type: CAZyme
Location: 5521 - 8049 (+)
Gene ID: HRGMv2_4688_1_7
Type: CAZyme
Location: 8060 - 9388 (+)
Gene ID: HRGMv2_4688_1_8
Type:
Location: 9402 - 10493 (+)
Gene ID: HRGMv2_4688_1_9
Type:
Location: 10511 - 11668 (+)
Gene ID: HRGMv2_4688_1_10
Type: CAZyme
Location: 11734 - 13695 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-826
→
Genus
CAJOOD01
→
Species
CAJOOD01 sp019421105

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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