Cluster: HRGMv2_4683_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4683
- CGC Family ID: CGCFAM_06290
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4683_18 | HRGMv2_4683_18_4 | 4818 | 7796 | - | GH3 |
| TC | HRGMv2_4683_18 | HRGMv2_4683_18_5 | 7854 | 8720 | - | 2.A.7.2.1 |
| TC | HRGMv2_4683_18 | HRGMv2_4683_18_6 | 8800 | 9969 | - | 3.A.1.115.1 |
| TC | HRGMv2_4683_18 | HRGMv2_4683_18_7 | 9962 | 10762 | - | 3.A.1.128.6 |
| STP | HRGMv2_4683_18 | HRGMv2_4683_18_8 | 10796 | 12058 | - | AAA |
| TC | HRGMv2_4683_18 | HRGMv2_4683_18_9 | 12055 | 13314 | - | 9.A.40.2.4 |
Gene ID: HRGMv2_4683_18_4
Type: CAZyme
Location: 4818 - 7796 (-)
Type: CAZyme
Location: 4818 - 7796 (-)
Gene ID: HRGMv2_4683_18_5
Type: TC
Location: 7854 - 8720 (-)
Type: TC
Location: 7854 - 8720 (-)
Gene ID: HRGMv2_4683_18_6
Type: TC
Location: 8800 - 9969 (-)
Type: TC
Location: 8800 - 9969 (-)
Gene ID: HRGMv2_4683_18_7
Type: TC
Location: 9962 - 10762 (-)
Type: TC
Location: 9962 - 10762 (-)
Gene ID: HRGMv2_4683_18_8
Type: STP
Location: 10796 - 12058 (-)
Type: STP
Location: 10796 - 12058 (-)
Gene ID: HRGMv2_4683_18_9
Type: TC
Location: 12055 - 13314 (-)
Type: TC
Location: 12055 - 13314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.