Cluster: HRGMv2_4683_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4683
- CGC Family ID: CGCFAM_02249
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4683_7 | HRGMv2_4683_7_11 | 11981 | 14902 | - | GH3 |
| TF | HRGMv2_4683_7 | HRGMv2_4683_7_12 | 15113 | 15376 | + | HTH_11 |
| TC | HRGMv2_4683_7 | HRGMv2_4683_7_13 | 15427 | 18057 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_4683_7_11
Type: CAZyme
Location: 11981 - 14902 (-)
Type: CAZyme
Location: 11981 - 14902 (-)
Gene ID: HRGMv2_4683_7_12
Type: TF
Location: 15113 - 15376 (+)
Type: TF
Location: 15113 - 15376 (+)
Gene ID: HRGMv2_4683_7_13
Type: TC
Location: 15427 - 18057 (-)
Type: TC
Location: 15427 - 18057 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.