Cluster: HRGMv2_4683_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4683
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4683_3 | HRGMv2_4683_3_34 | 46272 | 49121 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_4683_3 | HRGMv2_4683_3_35 | 49743 | 49952 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4683_3 | HRGMv2_4683_3_36 | 49953 | 50405 | + | Metallophos_2 |
| TC | HRGMv2_4683_3 | HRGMv2_4683_3_37 | 50449 | 51330 | + | 2.A.119.2.1 |
| pfam | HRGMv2_4683_3 | HRGMv2_4683_3_38 | 51327 | 51593 | + | CM_2 |
| pfam | HRGMv2_4683_3 | HRGMv2_4683_3_39 | 51601 | 52188 | - | R3H |
| TC | HRGMv2_4683_3 | HRGMv2_4683_3_40 | 52199 | 53608 | - | 2.A.9.3.5 |
Gene ID: HRGMv2_4683_3_34
Type: CAZyme
Location: 46272 - 49121 (+)
Type: CAZyme
Location: 46272 - 49121 (+)
Gene ID: HRGMv2_4683_3_35
Type:
Location: 49743 - 49952 (+)
Type:
Location: 49743 - 49952 (+)
Gene ID: HRGMv2_4683_3_36
Type: pfam
Location: 49953 - 50405 (+)
Type: pfam
Location: 49953 - 50405 (+)
Gene ID: HRGMv2_4683_3_37
Type: TC
Location: 50449 - 51330 (+)
Type: TC
Location: 50449 - 51330 (+)
Gene ID: HRGMv2_4683_3_38
Type: pfam
Location: 51327 - 51593 (+)
Type: pfam
Location: 51327 - 51593 (+)
Gene ID: HRGMv2_4683_3_39
Type: pfam
Location: 51601 - 52188 (-)
Type: pfam
Location: 51601 - 52188 (-)
Gene ID: HRGMv2_4683_3_40
Type: TC
Location: 52199 - 53608 (-)
Type: TC
Location: 52199 - 53608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.