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Cluster: HRGMv2_4681_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4681_4 HRGMv2_4681_4_79 76768 78792 + GH97
STP HRGMv2_4681_4 HRGMv2_4681_4_80 78931 80373 + SBP_bac_1
pfam HRGMv2_4681_4 HRGMv2_4681_4_81 80380 81354 + BPD_transp_1
TC HRGMv2_4681_4 HRGMv2_4681_4_82 81314 82231 + 3.A.1.1.48
TC HRGMv2_4681_4 HRGMv2_4681_4_83 82241 83905 + 3.A.1.1.28
CAZyme HRGMv2_4681_4 HRGMv2_4681_4_84 83909 85648 + GH2
TF HRGMv2_4681_4 HRGMv2_4681_4_85 85650 86636 + LacI
pfam HRGMv2_4681_4 HRGMv2_4681_4_86 86638 87705 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_4681_4 HRGMv2_4681_4_87 87707 89680 + GH3
CAZyme HRGMv2_4681_4 HRGMv2_4681_4_88 89680 91278 + GH13_31
Gene ID: HRGMv2_4681_4_79
Type: CAZyme
Location: 76768 - 78792 (+)
Gene ID: HRGMv2_4681_4_80
Type: STP
Location: 78931 - 80373 (+)
Gene ID: HRGMv2_4681_4_81
Type: pfam
Location: 80380 - 81354 (+)
Gene ID: HRGMv2_4681_4_82
Type: TC
Location: 81314 - 82231 (+)
Gene ID: HRGMv2_4681_4_83
Type: TC
Location: 82241 - 83905 (+)
Gene ID: HRGMv2_4681_4_84
Type: CAZyme
Location: 83909 - 85648 (+)
Gene ID: HRGMv2_4681_4_85
Type: TF
Location: 85650 - 86636 (+)
Gene ID: HRGMv2_4681_4_86
Type: pfam
Location: 86638 - 87705 (+)
Gene ID: HRGMv2_4681_4_87
Type: CAZyme
Location: 87707 - 89680 (+)
Gene ID: HRGMv2_4681_4_88
Type: CAZyme
Location: 89680 - 91278 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-449
→
Genus
CAG-449
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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