Cluster: HRGMv2_4681_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_06290
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_27 | 27439 | 28698 | + | 9.A.40.2.4 |
| STP | HRGMv2_4681_3 | HRGMv2_4681_3_28 | 28695 | 29954 | + | AAA |
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_29 | 30011 | 30790 | + | 3.A.1.128.6 |
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_30 | 30783 | 31958 | + | 3.A.1.115.1 |
| CAZyme | HRGMv2_4681_3 | HRGMv2_4681_3_31 | 32075 | 35047 | + | GH3 |
Gene ID: HRGMv2_4681_3_27
Type: TC
Location: 27439 - 28698 (+)
Type: TC
Location: 27439 - 28698 (+)
Gene ID: HRGMv2_4681_3_28
Type: STP
Location: 28695 - 29954 (+)
Type: STP
Location: 28695 - 29954 (+)
Gene ID: HRGMv2_4681_3_29
Type: TC
Location: 30011 - 30790 (+)
Type: TC
Location: 30011 - 30790 (+)
Gene ID: HRGMv2_4681_3_30
Type: TC
Location: 30783 - 31958 (+)
Type: TC
Location: 30783 - 31958 (+)
Gene ID: HRGMv2_4681_3_31
Type: CAZyme
Location: 32075 - 35047 (+)
Type: CAZyme
Location: 32075 - 35047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.