Cluster: HRGMv2_4681_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_01531
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_12 | 8293 | 12399 | + | 2.A.6.3.6 |
| pfam | HRGMv2_4681_3 | HRGMv2_4681_3_13 | 12478 | 13206 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_14 | 13203 | 13931 | - | 3.A.1.105.15 |
| NULL(UNKNOWN) | HRGMv2_4681_3 | HRGMv2_4681_3_15 | 13934 | 14497 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4681_3 | HRGMv2_4681_3_16 | 14623 | 17181 | - | 3.A.9.1.2 |
| pfam | HRGMv2_4681_3 | HRGMv2_4681_3_17 | 17314 | 17814 | - | QueT |
| CAZyme | HRGMv2_4681_3 | HRGMv2_4681_3_18 | 17972 | 19237 | + | GH18 |
Gene ID: HRGMv2_4681_3_12
Type: TC
Location: 8293 - 12399 (+)
Type: TC
Location: 8293 - 12399 (+)
Gene ID: HRGMv2_4681_3_13
Type: pfam
Location: 12478 - 13206 (-)
Type: pfam
Location: 12478 - 13206 (-)
Gene ID: HRGMv2_4681_3_14
Type: TC
Location: 13203 - 13931 (-)
Type: TC
Location: 13203 - 13931 (-)
Gene ID: HRGMv2_4681_3_15
Type:
Location: 13934 - 14497 (-)
Type:
Location: 13934 - 14497 (-)
Gene ID: HRGMv2_4681_3_16
Type: TC
Location: 14623 - 17181 (-)
Type: TC
Location: 14623 - 17181 (-)
Gene ID: HRGMv2_4681_3_17
Type: pfam
Location: 17314 - 17814 (-)
Type: pfam
Location: 17314 - 17814 (-)
Gene ID: HRGMv2_4681_3_18
Type: CAZyme
Location: 17972 - 19237 (+)
Type: CAZyme
Location: 17972 - 19237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.