Cluster: HRGMv2_4681_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4681
- CGC Family ID: CGCFAM_01119
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4681_1 | HRGMv2_4681_1_276 | 323660 | 324556 | - | 2.A.7.2.1 |
| pfam | HRGMv2_4681_1 | HRGMv2_4681_1_277 | 324553 | 325815 | - | Hexapep | Hexapep |
| TF | HRGMv2_4681_1 | HRGMv2_4681_1_278 | 325817 | 326380 | - | HTH_3 |
| CAZyme | HRGMv2_4681_1 | HRGMv2_4681_1_279 | 326470 | 327402 | - | GT2 |
Gene ID: HRGMv2_4681_1_276
Type: TC
Location: 323660 - 324556 (-)
Type: TC
Location: 323660 - 324556 (-)
Gene ID: HRGMv2_4681_1_277
Type: pfam
Location: 324553 - 325815 (-)
Type: pfam
Location: 324553 - 325815 (-)
Gene ID: HRGMv2_4681_1_278
Type: TF
Location: 325817 - 326380 (-)
Type: TF
Location: 325817 - 326380 (-)
Gene ID: HRGMv2_4681_1_279
Type: CAZyme
Location: 326470 - 327402 (-)
Type: CAZyme
Location: 326470 - 327402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-449
Genus
CAG-449
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.